SE2850632

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9637
  • Sorghum bicolor
  • SE2850632
  • PIF/harbinger
  • To2
  • chromosome_2:9281740-9281988
  • TTA
  • AGGCCTTGTTTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT              TCACCCCAAAAACCAAAATTTTTT        TCCGTCACATCGAATCTTGCGGCACATATATGGAGCAGTAAATACAGACAAAAATAAAAACTAATTGCACAGTTTACCTGTAAATCAC
  AGGCCTTGTTTAGT                        TAAGATTC                                                                                        
  ||||||||||||||                        ||||||||                                                                                        G
  TCCGGAACAAATCA                        AGGCTTTT                                                                                        
AT              ------------------------        GAAAAGTCAAAAGCCTTGACATCGTGAAAGCAAAAATAAACTGTTTATAATAGGTTAGTATTTCATTGATCCGAATTTTCTAAGTAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3