SE2850642

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9647
  • Sorghum bicolor
  • SE2850642
  • PIF/harbinger
  • To26
  • chromosome_10:18046170-18046407
  • TAA
  • AGGCCTTGTTTAGTTGGTAAAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               G       TT          GGTACTGTAGCACTTTCGTTTGTTTGTGACAAGTATTGTCCAATCATAGACTAATTAGAGTCCAAAGATTCATCTCGCGATT
  AGGCCTTGTTTAGTT GTAAAAA  TTGGATTTTT                                                                                  
  ||||||||||||||| |||||||  ||||||||||                                                                                   
  TCCGGAACAAATCAA CGTTTTT  AAGTTCTAAA                                                                                  
AA               G       TT          GGGCAGTGTAGTTTAGAACGCCGTGTACGTACCTCATAATTTAAATCTGCTTTTGTTTTTGATTAATGTGTCAAACGGACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3