SE2850683

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9688
  • Sorghum bicolor
  • SE2850683
  • PIF/harbinger
  • To2
  • chromosome_3:5270409-5270657
  • TTA
  • AGGCCTTGTTTACTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            C    ACCC      GCAAAATTTTTCAAGATTCTCCGTCACATCGAATCTTTAGACGCATGCATGGAGTATTAAATATAGACGAAAATAAAAACTAATTGCACAGTTTGG
  AGGCCTTGTTTA TTCC    AAAAAT                                                                                                
  |||||||||||| ||||    ||||||                                                                                                 
  TCCGGAACAAAT AAGG    TGCTTT                                                                                                
AT            C    -ACT      TGTAAAGCACTGTGACATCGTGAAAGCAAACAAACACCATTAATAACAAGTTGATACCTGATTGATCCGAGTTTTCTAAGCAGAACAGTTAAAGCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3