SE2830703

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9708
  • Sorghum bicolor
  • SE2830703
  • hAT
  • Hat31
  • chromosome_8:4855427-4855586
  • GCATAAAC
  • CCATAGTTCTTAAGGCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GCATAAA               C  AAA    AG    GACAATGCGCCGCCACCTGGACGCCTAGGCGCCCGCCTAGGCGA
       CCATAGTTCTTAAGG GT   GGCG  GCAT                                            
       ||||||||||||||| ||   ||||  ||||                                            G
       GGTATCAAGAATTCC CA   GTGG  ATCC                                            
CAAATAC               A  ---    --    GCTACGGATCCGCAGGTCCGCTAGGGGGTCGCGGAACGTTTTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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