SE2850704

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9709
  • Sorghum bicolor
  • SE2850704
  • PIF/harbinger
  • To22
  • chromosome_10:59689420-59689668
  • TTA
  • AGAGCAAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT         TTAATAATAC   CCACTTGCTGGCTGTAAGATTTCTTACAGCCTTCTCCCAGCCCACCCATACAATAGTTACCTATTCACTATTAATACATGGCCCACTTATCTCTCTCACAA
  AGAGCAAGT          AGC                                                                                                     
  |||||||||          |||                                                                                                      
  TCTCGTTCA          CCG                                                                                                     
AT         -TAATACCAC   ACATTCGACCGATTTACGACTACACCTCCTCTCTTCCCTCCTCTCTCTCCTCTTCGTCCGACATTCGAATGTCGGTCGAATCTGTGTTCTTGGTTTTTTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3