Plant MITE

SE2810738

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_9743
Sorghum bicolor
SE2810738
Tc1/Mariner
St8
chromosome_2:15025051-15025200
TA
TACTCCCTCCATTCCAAATTATAATATGTTTTGGCTTTCTAGATACATATCTTTTGCTATGCACTTAGATATACACTATGTCTAGATACATAGTAAAAGCAATGTATCTTGAAAAGCCAAAACGTCTTATGATTTGGAACAGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

         CA             T             - T        AT           CAC         C
TACTCCCTC  TTCCAAATTATAA ATGTTTTGGCTTT C AGATACAT  CTTTTGCTATG   TTAGATATA 
|||||||||  ||||||||||||| ||||||||||||| | ||||||||  |||||||||||   ||||||||| A
ATGAGGGAG  AAGGTTTAGTATT TGCAAAACCGAAA G TCTATGTA  GAAAATGATAC   GATCTGTAT 
         AC             C             A T        AC           ATA         C

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2810738

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2810738