SE2850750

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9755
  • Sorghum bicolor
  • SE2850750
  • PIF/harbinger
  • To1
  • chromosome_6:40045190-40045438
  • TGA
  • AGGCCTTGTTTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TG                      -  GAAAAGTTTTCGGAACTGTAGCATTTTTATTTTTATTTGACAAACATTATCCAATCATAGAGTAACTAGGCTTAAAAGATTCATCTCGTGATTTACAG
  AGGCCTTGTTTAGTTCCGGAAA CT                                                                                                  
  |||||||||||||||||||||| ||                                                                                                   
  TCCGGAACAAATCAAGTGGGGT TT                                                                                                  
AG                      T  TCGTTTTTTAAAGGTTCTAAGAGGCAGTGTAGCTTAGAATGCGGTGTATGTACTTCATAATTTATATCTGCTTTTAATTTTGATTAATGTGTCAAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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