SE2850751

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9756
  • Sorghum bicolor
  • SE2850751
  • PIF/harbinger
  • To2
  • chromosome_7:58529398-58529646
  • AAG
  • GGCCTTGTTTAGTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAG           G    ---- GA      AAATTTCGCGACACTGTAGCACTTTCGTTTGTTTGTGGTAATTATTGTCTAACTATAGACTAACTAGGCTCAAAAGATTCGTCTCGTCGATTTCG
   GGCCTTGTTTA TTCC    G  GCGAAA                                                                                               
   ||||||||||| ||||    |  ||||||                                                                                               A
   CCGGAACAAAT AAGG    T  TTTTGG                                                                                               
GAA           G    TGGG --      GTTTTAAAAAGTTCTAAGGGGTAGTGTAGCTTAGAAATCTGCGTACGTACCTCATAATTTATATCTGCTTTTATTTTTGATTAACGTGTCAAACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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