SE2850767

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9772
  • Sorghum bicolor
  • SE2850767
  • PIF/harbinger
  • To1
  • chromosome_3:57768913-57769151
  • TTA
  • AGGCCTTGTTCAGTTTGGAAAAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT          C     GG             TTTTGGCTACTGTAGCACTTTCGTTTGTTTGTGACAAATATTGTCCAATTATGGACTAACTAGACTCAAAAGATTCATCTCGCGAG
  AGGCCTTGTT AGTTT  AAAAAATTTTGGT                                                                                      
  |||||||||| |||||  |||||||||||||                                                                                      T
  TCCGGAACAA TCAAA  TTTTTTAAAGTTC                                                                                      
AT          A     GG             TAAGGGGTAGTGTAGCTTAGAACATTGTGTACGTACTTTATAATTTATATCTATTTTTGTTTATGATTAATGTGTCAAATGGACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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