SE2850772

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9777
  • Sorghum bicolor
  • SE2850772
  • PIF/harbinger
  • To14
  • chromosome_7:62441033-62441286
  • TTA
  • AGGCCTTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT           -----         TTTCTTTTTTTTTTTTGCAAAATGGACACTATAGCACTTTCATTTGTATTTAACAAATATTGTTCAATCATGGACTAACTAGGCTCAAAATATTCGTATCGC
  AGGCCTTGTTT     GGTTCCATT                                                                                                      
  |||||||||||     |||||||||                                                                                                      A
  TCCGGAACAAA     GGTTTTAAA                                                                                                      
AT           TAAAG         CGTTTTTAAAATCTAAGAGGTAGTGTAGCTTAGAACGCCGCATATGTACTTCATAACTTATATCTATTTTTATTATTGATTAACGTGTCAAACAGACATAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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