SE2850850

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9855
  • Sorghum bicolor
  • SE2850850
  • PIF/harbinger
  • To23
  • chromosome_6:58622257-58622562
  • TTA
  • AGGGGGTGTTTAGTTCTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT       G           -TTTTT       AAATT   TTTTGGTCCATCATTTTGCAAAATGGAACTAAATACCATGCAAATTTTTTGGCAAAAAAGGTGGTTATTCTCCATTTTGGATTTTGGCCTCAAGAGAAAAAAAAAACCAAAAA
  AGGGGGT TTTAGTTCTCC      TCCAAAA     GGG                                                                                                                 
  ||||||| |||||||||||      |||||||     |||                                                                                                                 A
  TCCCCCA AAATCAAGGGG      AGGTTTT     CGT                                                                                                                 
AT       G           TATTTT       ----A   TTTACGGTTGATGAAACCTCACTACTTTACATTTTACGGTTTTAAAAATCCCAGTACAAATCAAGGTAGGTTTTACGTCTTAAATAACGGGAGTACTCTCGGAGAACTCCGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3