SE2850893

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9898
  • Sorghum bicolor
  • SE2850893
  • PIF/harbinger
  • To94
  • chromosome_9:43149138-43149341
  • TAA
  • AGGGCCTGTTTGGCAGGGCTCCTCTCCGGCTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                        ---TCC      ---       CTAGAGGAGCCCTGCCAAACGTTTTTGTGGAGAAGTCGTTTTTAAGTAAAAAGCAGA
  AGGGCCTGTTTGGCAGGGCTCCTC      GGCTCC   GGCTCCT                                                         
  ||||||||||||||||||||||||      ||||||   |||||||                                                          
  TCCCGGACAAACCGTCCCGAGGAG      CCGAGG   TCTCCTC                                                         
AA                        TGCTCT      AGA       GGTTTTGGTAAAACCTCTTCGGTATTAAACACCGAAGTGATTTTGCCGAGGTCGAGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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