SE2850907

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9912
  • Sorghum bicolor
  • SE2850907
  • PIF/harbinger
  • To3
  • chromosome_1:60054956-60055204
  • CTT
  • GGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTT               ACCCCAA     AAAAAGTTTTCAAGATTCTCCGTCACATCGAATCTTGCGGCACATGCATGAAGCATTAAATATAAACGAAAGCAAAAACTAATTACACAGTTTAGCTG
   GGCCTTGTTTAGTTC       AAAGC                                                                                                  
   |||||||||||||||       |||||                                                                                                   
   CCGGAACAAATCAAG       GCTTT                                                                                                  
TTC               -------     TCTAAAGCCTAAAGCCATGACATCGTAAAAGCAAACAAACACTGTTTATAATAGGTTAATACCTGATTGATCCTAGTTTTCTAAGCAGAGCGCTAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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