SE2830915

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9920
  • Sorghum bicolor
  • SE2830915
  • hAT
  • Hat8
  • chromosome_2:67332603-67332784
  • TTCCATGA
  • TGAGGGGCGAAGCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCCATGACATGAATCC G             -----------        TAGAGGGGGGTGCCTTTCTCTTATAGTTGTGAAAATTGAATCTATAACCAT
                 T AGGGGCGAAGCTA           AAGCAAAT                                                   
                 | |||||||||||||           ||||||||                                                    
                 A TCCCCGCTTCGAT           CACCCACG                                                   
           AGTCCT G             GCAACTTCCAA        GGTCCGTGGGTGGTTTTAAACTTTTTAGTGATAATCTTTGTTTAAAAATGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3