SE2850946

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9951
  • Sorghum bicolor
  • SE2850946
  • PIF/harbinger
  • To14
  • chromosome_2:62498872-62499120
  • TAA
  • AGGCCTTGTTTACTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                  C  ATATTTTGTAAAATATTTCAGATTTTCTGTCACATCAAATCTTGCGGTACATGCATGAAACATTAAATATAAGTAAAAAGGATAACTAATTACATAGTTTGC
  AGGCCTTGTTTACTTTCT AA                                                                                                      
  |||||||||||||||||| ||                                                                                                       
  TCCGGAACAAATGAACGT TT                                                                                                      
AA                  -  TAAAAAATGTTTTATATTTATCATTGTAAAAACAAACATAAACTGTTTATAACAAGTTAGTATTCGATTGATCCTAATTTTCTAAGTAGAGTGTTTAATACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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