SE2850957

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9962
  • Sorghum bicolor
  • SE2850957
  • PIF/harbinger
  • To10
  • chromosome_6:3361740-3361884
  • TTA
  • AGGCCTTGTTTGGATGTTGTCGTATTCACTTCAATCCATGTGTGTTGGTGTGGATTGGGGTGGAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   C             T    T      T                  T                   AG
  AGG CTTGTTTGGATGT GTCG ATTCAC TCAATCCATGTGTGTTGG GTGGATTGGGGTGGAATTT  
  ||| ||||||||||||| |||| |||||| |||||||||||||||||| |||||||||||||||||||  T
  TCC GAACAAACCTACA CAGC TAAGTG AGTTAGGTGTACACAACT CACCTAACCTCACTTTGAA  
AT   A             T    C      T                  C                   CT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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