SE2830961

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9966
  • Sorghum bicolor
  • SE2830961
  • hAT
  • Hat11
  • chromosome_2:17416000-17416167
  • CACGTGTG
  • CACGTGTGTAGGGGTGCAAAGGGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                    G    AACCT             C                                   AATTT
CACGTGTGTAGGGGTGCAAA GGGT     TTAGGTGCACCTC AAACCTCTTTAGTTCAAATATTTGTACTACTTCTT     
|||||||||||||||||||| ||||     ||||||||||||| |||||||||||||||||||||||||||||||||||      
GTGTGCACATCCCCACGTTT CTCA     AATCCACGTGGAG TTTGGAGAAATCAAGTTTATAAATATGATGAAGAG     
                    A    CTACT             A                                   GTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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