SE2850964

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9969
  • Sorghum bicolor
  • SE2850964
  • PIF/harbinger
  • To1
  • chromosome_9:2423422-2423669
  • TAA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                        GAAAAGTTTTCGAAACTGTAGCACTTTCGTTTTTATTTGACAAACATTATCCAATTATAGAGTAACTAGGCTTAAAAGATTCATCTCGTGATTTACAT
  AGGCCTTGTTTAGTTCCGAAAATT                                                                                                  
  ||||||||||||||||||||||||                                                                                                   
  TCCGGAACAAATCAAGTGGAGTTT                                                                                                  
AA                        TTGGTTTTAAAAAGTTCTAAAAGGCAGTGTAGCTTAGAATGCGGTGTACGTACCTCATAATTTATATCTGCTTTTATTTTTGATTAACGTGTCAAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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