SE2810987

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9992
  • Sorghum bicolor
  • SE2810987
  • Tc1/Mariner
  • St16
  • chromosome_8:47517404-47517552
  • TA
  • TACTCCCTCCAATCCAAATTATAAGGCGCTTTGACTTTTTTGGTATATCCATTTTACTATGTATTTAGATA

Secondary structure and sequence

TSD    TIR
5'



3' 
          AA             G                  A          A               AAT
TACTCCCTCC  TCCAAATTATAAG CGCTTTGACTTTTTTGGT TATCCATTTT CTATGTATTTAGATA   
||||||||||  ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||   A
ATGAGGGAGG  AGGTTTAATATTC GCGAAACTGAAAAAACCA GTAGGTAAAA GATACATAGATCTGT   
          CA             A                  A          C               ATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3