SE2850994

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9999
  • Sorghum bicolor
  • SE2850994
  • PIF/harbinger
  • To2
  • chromosome_10:1303095-1303340
  • TAA
  • AGACCTTGTTTACTTCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  A         C  C  TTTTT           ------   CATTGTAGCACTTTCGTTTGTATTTGACAAATATTGTCCAATTATGGACTAATTAGGCTCAAAAGATTCATCTCGCAAATT
  AG CCTTGTTTA TT CA     TTTTGCAAAAT      GGA                                                                                 
  || ||||||||| || ||     |||||||||||      |||                                                                                  
  TC GGAACAAAT AA GT     GAAACGTTTTA      CTA                                                                                 
AA  C         C  A  TTTTT           AAAAGT   AACAGTGTAGCTTAGAACGATGTGTATGTACCTCATAATTTATATCTATTTTTCTTTATTGATTAACGTGTCAAATGGACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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