SE2851004

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10009
  • Sorghum bicolor
  • SE2851004
  • PIF/harbinger
  • To1
  • chromosome_1:69698294-69698542
  • TAA
  • AGGCCTTGTTTAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               -----------ACACCCAAA     AAAATTTTACAGGATTCTCCGTCACATCAAATCTTACGACACATGCATAAAGTATTAAATATAGATAAAAAGAATAACTAATTACACA
  AGGCCTTGTTTAGAT                    AATCC                                                                                        
  |||||||||||||||                    |||||                                                                                         
  TCCGGAACAAATCTA                    CTGTG                                                                                        
AA               CTTTTTTCAAAACTCTAAAA     ACATTGTAAAAACAAAAATAAACTGTTTATAACAGATTAATACCTCATTGATCCGAATTTTCTAAGCAGAGCACTAAATGTTCATTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3