SE2851059

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10064
  • Sorghum bicolor
  • SE2851059
  • PIF/harbinger
  • To3
  • chromosome_3:10713035-10713282
  • TTA
  • AGGCCTTGTTTAGTTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 ---CTC    AACCAAAAAATTTTCAAGATTTTTCATCACATCGAATCTTGTAGCACATGCATGAAACATTAAATATAGACGAAAACAAAAACTAATTACACAGTT
  AGGCCTTGTTTAGTTCA      TGAA                                                                                                
  |||||||||||||||||      ||||                                                                                                T
  TCCGGAACAAATCAAGT      CTTT                                                                                                
AT                 TTTTCA    TCAAAAGCCATGACATCGTGAAAGCAAACAAACACTGTTTATAATAGGTTAGTACCTGATTGATCCTAATTTTCTAAGCAGAGCACTAAATGTCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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