SE2831111

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10116
  • Sorghum bicolor
  • SE2831111
  • hAT
  • Hat73
  • chromosome_9:47619731-47619903
  • ATTCTGGT
  • GGTCAGGGGCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTCT      G      GTCAAAATT    AAAGACTAAGGCCATTGCATTAGACATGAGTGCTAATTGTGCTTAGCTATAGAAAATAT
     GGTCAG GGCGGA         GGCC                                                           
     |||||| ||||||         ||||                                                           A
     TTAGTC CCGCCT         GGTT                                                           
TGGTC      A      --------G    GTGATCCCGGTGATCCCGATACCGGGATCAGAATCGGAAATTAACGTCACCTGTTTAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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