SE2831123

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10128
  • Sorghum bicolor
  • SE2831123
  • hAT
  • Hat1
  • chromosome_7:22347541-22347723
  • TGCTCAAT
  • CAGGGGCGAAGCTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TGCTCAAT   G           CTACAAGCCA       CAAATGCACCACCCAAATTTTGCAAAAACAGTGATTTTTTCTAAAATTTTACCATA
        CAG GGCGAAGCTAG          GTGGGTG                                                        
        ||| |||||||||||          |||||||                                                        T
        GTC CCGCTTCGATC          TCGTTTA                                                        
TAACTCGT   A           ----------       ACCTCCCACCACGTGAACGGAACACCCACGTATCTGAACACGATATGTACCACGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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