SE2811131

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10136
  • Sorghum bicolor
  • SE2811131
  • Tc1/Mariner
  • St7
  • chromosome_1:56564544-56564806
  • TA
  • TACTCCCTCCGTACTCATAAAGAAAGTCGTTTTGGACA

Secondary structure and sequence

TSD    TIR
5'



3' 
      C  C            A         T     AG    - AGTCAAACATTGGGAATATAAATCATGAATAACTTTTAAGTTGTTGAGTTTGGAAATGTGAAAACCATATGAATAGATTTGTCTTG
TACTCC TC GTACTCATAAAG AAGTCGTTT GGACA  GTTT G                                                                                      
|||||| || |||||||||||| ||||||||| |||||  |||| |                                                                                       
ATGAGG AG CATGAGTGTTTC TTCAGCAAA CCTGT  CTGT C                                                                                      
      A  A            C         T     CG    A CAAAGGTTTCGGATTGAAGCTGAGGAACAGAAATATTTTTATAAATAGTTTTTCACCATATACATATAAAAATACTATCATAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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