SE2831138

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10143
  • Sorghum bicolor
  • SE2831138
  • hAT
  • Hat77
  • chromosome_2:1042969-1043130
  • AGCATCGG
  • CAGGGGCGGAGCTAGGGGGGTTTATCGGGGTCAGCTGACCCCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
AGCATCGG                G  G ---    C          GA  C   TAAAA   G    AT -   TA   ATTT
        CAGGGGCGGAGCTAGG GG T   TTAT GGGGTCAGCT  CC CTA     TGT TGAA  C CTA  TAA    
        |||||||||||||||| || |   |||| ||||||||||  || |||     ||| ||||  | |||  |||     
        GTCCCCGCTTCGGTCT TC G   GGTA CCCCAGTCGA  GG GAT     ATG ATTT  G GAT  ATT    
GGCTACGA                A  G TTC    A          --  T   TAGTG   G    AT T   TG   GTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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