SE2851148

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10153
  • Sorghum bicolor
  • SE2851148
  • PIF/harbinger
  • To1
  • super_14:1143805-1144042
  • TTA
  • AGGCCTTGTTTAGTTCGCAAAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               C           ------C     TCCCCGTCACATCGAATCTTTGGTCGCATGCATGGAGCATTAAATATAGACGAAAATAAAAACTAACTGCACAGTTTACCT
  AGGCCTTGTTTAGTT GCAAAAATTTT       AAGAT                                                                                 
  ||||||||||||||| |||||||||||       |||||                                                                                  
  TCCGGAACAAATCAA CGTTTTTAAAA       CCGAT                                                                                 
AT               C           CCCAAAA     GACATCGTGAAAGCAAAAATAAACTGTTTGTAACAGGTTAGTATCTCATTTATCCGAGTTTTCTAAGTAGAGTGTTTAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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