SE2851162

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10167
  • Sorghum bicolor
  • SE2851162
  • PIF/harbinger
  • To4
  • chromosome_9:54639584-54639822
  • TTA
  • AGGCCTTGTTTAGTTCGCGAAAAATTTTGGATTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                G    -AAA   T       -    CTGTAGCACTTTCGGCTTTATTTGATAATTATTATTTATTATAGACTAACTAGGCTTAAAAGATTCGTCTCGCAAAT
  AGGCCTTGTTTAGTTC CGAA    TTT GGATTTC GCTA                                                                             
  |||||||||||||||| ||||    ||| ||||||| ||||                                                                             T
  TCCGGAACAAATCAAG GTTT    AAG TCTAAAG ACAG                                                                             
AT                A    AAAA   T       G    TGTAGCTTAGAACGCTGTGTACGTACTTCGTAACTTATATCTATTTTTTTTCTATTGATTAACGTGTCAAATAGACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3