SE2851186

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10191
  • Sorghum bicolor
  • SE2851186
  • PIF/harbinger
  • To1
  • chromosome_5:61504125-61504371
  • TTA
  • AGGCCTTGTTTAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               ACACCCAAAAACCTAAAACTTTA    ATTCCCCATCACATCGAATCTTGCGGCACTTGCATGGAACATTAAATATAGATAAAAAGATAACTAATTGCACAGTTTACCTGTAAATCAC
  AGGCCTTGTTTAGAT                       CAAG                                                                                           
  |||||||||||||||                       ||||                                                                                            
  TCCGGAACAAATCTA                       GGTT                                                                                           
AT               -----------------------    AAAAAAAACCTAAAACTGTGACATCGTGAAAACAAAAATAAACTGTTTGTAACAGGTCAATACCTCATTGATTCGAATTTTCTAAGCATAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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