SE2851194

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10199
  • Sorghum bicolor
  • SE2851194
  • PIF/harbinger
  • To21
  • chromosome_2:67745013-67745196
  • TTA
  • AGGGCCTGTTTGGTTCCTCTTGCTAAATTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   G                             -----C         TTATTTTAGCTACTCTTGGATGACTAATGGAACTAAACTATTTT
  AGG CCTGTTTGGTTCCTCTTGCTAAATTTTAG      TAGCTAAAA                                            
  ||| |||||||||||||||||||||||||||||      |||||||||                                            A
  TCC GGACAAACCAAGGGGAATGATTTAAAATC      TTTGAAATC                                            
AT   G                             AATCGA         AGTGAAATCATCGATTTCAAGGTTTGTGTAACTGATTTTCCTCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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