SE2851208

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10213
  • Sorghum bicolor
  • SE2851208
  • PIF/harbinger
  • To26
  • chromosome_2:6449458-6449707
  • TAA
  • AGGCCTTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               CCCACCAAAATCTAAA      TCAAAATTTTCTGTCACATCGAATCTTATGCCACATGTATAGAGCACTAAATATAAATAAAAAAATAACTAATTACACAGTTTATCTGTAAATC
  AGGCCTTGTTTAGTT                AAAATT                                                                                              
  |||||||||||||||                ||||||                                                                                               
  TCCGGAACAAATCAA                CACTTT                                                                                              
AA               ----------------      TAAAAAATCTAAAGTGATACATCGTGAAAGTAAACATAAATCGTTTATAACAAATTAATACATGATTATTGATCTGAGTTTTCTAAGCAGAGCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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