SE2851232

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10237
  • Sorghum bicolor
  • SE2851232
  • PIF/harbinger
  • To4
  • chromosome_10:18198471-18198721
  • TTA
  • AGGCCTTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT           -    ACATCCGAAATCCAAAAACTTTT   GATTCCCCATCACATCGAATCTTGCGACACATGCATGGAGCATTAAATATAGATAAAAAAATAAATAATTGCACAATTTGCTTGTAATTTGCG
  AGGCCTTGTTT AGTT                       CAA                                                                                             
  ||||||||||| ||||                       |||                                                                                             A
  TCCGGAACAAA TCAA                       GGG                                                                                             
AT           A    -----------------------   ACCCACTTTTCAAGAAAACCCATGACATCGTGAAAGCAAACATAAACCGTTAACAACAGGTTGGTACCTGATTGATCCGAGTTTACTAAGCAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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