SE2851234

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10239
  • Sorghum bicolor
  • SE2851234
  • PIF/harbinger
  • To21
  • chromosome_7:18218124-18218308
  • TAA
  • AGGGCCTGTTTGGTTCCCCTTGCTAAATTTTAGCCAACT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                                       -------------   -  TTAGTCACTTTAGTAGCTAAAGTTCCAAACACAATGGCT
  AGGGCCTGTTTGGTTCCCCTTGCTAAATTTTAGCCAACT             GAA CT                                       
  |||||||||||||||||||||||||||||||||||||||             ||| ||                                       A
  TCCCGGACAAACCAAGGGGAACGATTTAAAATCGGTTGA             GAT AG                                       
AA                                       TTTTAATAAAATC   G  AACCCACTGATCACCCTGATTTGATAAAATCGAGGAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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