SE2851261

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10266
  • Sorghum bicolor
  • SE2851261
  • PIF/harbinger
  • To1
  • chromosome_6:2046135-2046383
  • TTA
  • AGGCCTTGTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                    -- AACTTTTTGGATTTGACACTGTAGCACTTTTGTTTTTATTTGACAAATATTATCCAATCATGGAGCAACTAGGCTTAAAAGATTCGTCTCGTGATTTACA
  AGGCCTTGTTTAGATCCAAA  A                                                                                                    
  ||||||||||||||||||||  |                                                                                                    G
  TCCGGAACAAATCTATGTGG  T                                                                                                    
AT                    AT TTTAGGTTTTGAAATGTTCTAAAGGGTAGTGTAGCTTAGAATGCCGTGTACGTACTGTGTAATTTATATCTATTTTTTCTATTGATTAATGTGTCAAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3