SE2851264

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10269
  • Sorghum bicolor
  • SE2851264
  • PIF/harbinger
  • To4
  • chromosome_1:18673735-18673970
  • TTA
  • AGGCCTTGTTTAGTTTGCAAAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                      A    ---CA      CCCGTCACATCGAATCTTTGGTCGTATGCATGGAGCATTAAATATAGACGAATAAAAGCTAATTGCACAGTTTACCTGT
  AGGCCTTGTTTAGTTTGCAAAA TTTT     AGATTC                                                                               
  |||||||||||||||||||||| ||||     ||||||                                                                               A
  TCCGGAACAAATCAAACGTTTT AAAA     AACCGA                                                                               
AT                      A    CCAAA      TGACATCGTGAAAGCAAAAATAAACTGTTTGTAACAGGTTAGTATCTCATTGATCCGAGTTTTCTAAGTAGAGTGTTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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