SE2851278

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10283
  • Sorghum bicolor
  • SE2851278
  • PIF/harbinger
  • To3
  • chromosome_1:49316307-49316554
  • TAA
  • AGGCCTTGTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA             TTCACTCC     CCAAAAAGTTTTCAAGATTCTCCGTCACATCGAATCTTGCGGCACATGCATTAAGCATTAAATATAGACGAAAACAAAAACTAATTACACAGTTTGGCT
  AGGCCTTGTTTAG        GAAAA                                                                                                   
  |||||||||||||        |||||                                                                                                    
  TCCGGAACAAATC        CACTT                                                                                                   
AA             ------TA     AAAAAAAACTAAAGTGATGACATCGTAAAAACAAACAAACACTATTTATAATAGGTTAATATCTGATTGATCCTAGTTTTTTAAGCAGAGCGCTAAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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