SE2851289

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10294
  • Sorghum bicolor
  • SE2851289
  • PIF/harbinger
  • To1
  • chromosome_10:54673071-54673376
  • CGA
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
 C    GCAATCTCTACCACTGTAACAAAGGAATATCCAATGTTTCAGCTATGTTTAAGGCCTTGTTTAGATCCAAAAAGTTTTTGGATTTTGATACTGTAGCACTTTCGTTTTTATTTGACAAACATTGTCCAATCATGGAGTAAATAGGC
  GAGA                                                                                                                                                  
  ||||                                                                                                                                                   
  TCCG                                                                                                                                                  
AA    GAACAAATCAAGTGGGGTTTTTGATTTTTGAAAAGTTCTAAGGGGCAGTGTAACTTAGAACGCCGTGTACGTACTTCGTAATTTATATCTACTTTTGTTTTTGATTAACGTGTCAAACGAACATTTAGCACTCTACTTAGAAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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