SE2851309

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10314
  • Sorghum bicolor
  • SE2851309
  • PIF/harbinger
  • To3
  • chromosome_10:41930820-41931066
  • TAA
  • AGGCCTTATTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA       A        CAAAAACTACCAAAAAATTTCAAGAT    C TCACATCGAATCTTGTGGCACATGTATGAAATATTAAATATAGATGAAAACAAAAACTAATTACACAGTTTAACTGTAAATCGCGAG
  AGGCCTT TTTAGTTC                          TCTC G                                                                                       
  ||||||| ||||||||                          |||| |                                                                                        
  TCCGGAA AAGTCAAG                          CGTT T                                                                                       
AA       C        --------------------------    - TCAAAAACGAGAGCCCATGACATCATAAAAGCAAAAATAAACTGTTTATAATAGGTTAGTATCTGATTGATTCGAGTTTTCTAAGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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