SE2851311

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10316
  • Sorghum bicolor
  • SE2851311
  • PIF/harbinger
  • To59
  • chromosome_10:5629915-5630048
  • TGA
  • AGGCCTCGTTCGTTTGACCGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TG   C              -C  -TTTTGAG C      AC           ATCCATATTAGTACA
  AGG CTCGTTCGTTTGAC  GG        G CTGGAA  TATTCCAGCTG               
  ||| ||||||||||||||  ||        | ||||||  |||||||||||               A
  TCC GAGCAAGCAAATTG  CC        C GACCTT  ATAAGGTCGAC               
AA   C              CA  TTACCAAA A      -A           CTTACTATCCGAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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