SE2851320

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10325
  • Sorghum bicolor
  • SE2851320
  • PIF/harbinger
  • To14
  • chromosome_7:55034648-55034894
  • TTA
  • AGGCCTTGTTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    C       CTTACACCAAAATCCAAAAACTTTTT    ATTTTCAATCACATCGAATCTTGCGGCACATACATGGAGTATTAAATATAGATAAAAAATAACTAATTGCACAATTTGCCTGTAATTTGC
  AGGC TTGTTTA                          CAAG                                                                                          
  |||| |||||||                          ||||                                                                                          G
  TCCG AACAAAT                          GGAT                                                                                          
AT    A       ----------------------CAAG    CCACTTTTCAAAAATCCATGACATCGTGAAAGCAAACATAAAACATTAATAACAAATTGATACCTGATTGATCCGAGTTTTTTAAGTAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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