SE2851321

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10326
  • Sorghum bicolor
  • SE2851321
  • PIF/harbinger
  • To3
  • chromosome_7:58776311-58776554
  • TTA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                CACCCAAAAACCAAAAAAATTTTA      CCCATCACA   AATCTTGCGGCACATACATGGAGTATTAAATATAGATAAAAAATAACTAATTGTATAGTTTACCTGTAATTTGCGAGA
  AGGCCTTGTTTAGTTC                        AGATTC         TCG                                                                              
  ||||||||||||||||                        ||||||         |||                                                                              C
  TCCGGAACAAATCAAG                        TGATGC         GCT                                                                              
AT                ------------------------      ---------   AAAAAACAGTGACATCGTGAAAGCAAACATAAACCATTAATAACAGGTTGGTATCTGATTGATCTGAGTTTTTCTAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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