SE1820046

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10374
  • Glycine max
  • SE1820046
  • Mutator
  • M14
  • Gm18:16303199-16303413
  • TTTACAAGG
  • CAAGGAGAAATGCTAGGAACACACTATTTTGAACACTTCCTCTCTTGTTTGTTGAAATTTATTGAAGATGACAAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTTA       AAA               A     -A       ------------C     T   T         T                  TTGTTGGTCCTA   GATG
     CAAGGAG   TGCTAGGAACACACT TTTTG  ACACTTC             TCTCT GTT GTTGAAATT ATTGAAGATGACAAAATT            CAT    
     |||||||   ||||||||||||||| |||||  |||||||             ||||| ||| ||||||||| ||||||||||||||||||            |||     
     GTTTCTC   ACGATCCTTGTGTGA AAGAT  TGTGAGG             AGAGA TAA CAATTTTAA TAATTTTTGTTGTTTTAG            GTA    
GAACA       CTC               -     GG       AAGTTTACGTAAT     T   C         C                  TTCTCTTTTCTA   ATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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