SE1860061

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10389
  • Glycine max
  • SE1860061
  • Micron
  • Mim1
  • Gm09:39102835-39103056
  • ATATATA
  • ATATATATATATAGAGGAGGGATCAAGTTACACCAAGAGTAACTCTAAGAAAGTTACTCTTCATCCTCACCATTCATTTTCTTGAAATCTAATGGTTGTAATGA

Secondary structure and sequence

TSD    TIR
5'



3' 
             A                             C         G                                              AA   ATGA
 ATATATATATAT GAGGAGGGATCAAGTTACACCAAGAGTAA TCTAAGAAA TTACTCTTCATCCTCACCATTCATTTTCTTGAAATCTAATGGTTGT  TGA    
 |||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||     
 TATATATATATA CTCCTCCCTAGTTCAATGTGGTTCTCATT AGATTCTTT AATGAGAAGTAGGAGTGGTAAGTAAAAGAACTTTAGATTACCAATA  ACT    
A            -                             A         -                                              --   AATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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