SE1860067

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10395
  • Glycine max
  • SE1860067
  • Micron
  • Mim1
  • Gm10:3273632-3273828
  • ATATATA
  • ATATATAGGAGGGGATCCACTTCCTCCAAGAGTAACTCTTTTAGATTTACTCCTCATCCTCACCATTTATTTTCTTAAGATCTAGTGGTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
       A      G        C              CT      T      C         C             A    C         TAATAAGT
 ATATAT GGAGGG ATCCACTT CTCCAAGAGTAACT  TTTAGA TTACTC TCATCCTCA CATTTATTTTCTT AGAT TAGTGGTTG        
 |||||| |||||| |||||||| ||||||||||||||  |||||| |||||| ||||||||| ||||||||||||| |||| |||||||||        A
 TATATA CCTCCC TAGGTGAA GAGGTTTTCATTGA  AAATCT AATGAG AGTAGGAGT GTAAGTAAAAGAA TCTA ATTACTAAT        
A      -      -        T              --      C      A         A             C    A         TCTAATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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