SE1830069

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10397
  • Glycine max
  • SE1830069
  • hAT
  • Hat3
  • Gm08:44218415-44218606
  • GTATACAC
  • GTATACACCTATGAAGCA

Secondary structure and sequence

TSD    TIR
5'



3' 
      AC                   TT   CCCTTTGCCGTGTCCGGTGTCCGACACGCGTCCGTGTCAGTGTCCGACACCGACACGACACCCGTAT
  GTAT  ACCTATGAAGCACGGACAC  CAG                                                                   
  ||||  |||||||||||||||||||  |||                                                                    
  CATA  TGGATACTTCGTGGCTGTG  GCT                                                                   
CA    --                   --   GTGCCTGTGGCCTGTGCTGTGCCTGTGCCTGTGCACCTATGGACATTACAGGTTTTATATCTTGCAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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