SE1820073

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10401
  • Glycine max
  • SE1820073
  • Mutator
  • M14
  • Gm08:21214653-21214841
  • ATGTAAACA
  • ACATGAGAAGTGCTAGAAACACACTCTCTAATTGGTTAAAAATTATTGAAACTA

Secondary structure and sequence

TSD    TIR
5'



3' 
ATGTAA                --------------             --A   G   A   A        ----    CAAAATCAAGAGAGAGA   ATTAAATATG
      ACATGAGAAGTGCTAG              AAACACACTCTCT   ATT GTT AAA TTATTGAA    ACTA                 ATC          
      ||||||||||||||||              |||||||||||||   ||| ||| ||| ||||||||    ||||                 |||           
      TGTACTCTTTATGATC              TTTGTGTGGGAGA   TAA CAA TTT AATAACTT    TGAT                 CAC          
TACCAA                CTTGTGTGAGAAAA             AAA   A   C   A        TTAC    -----------TTAAAA   ACAGAGTGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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