SE1820081

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10409
  • Glycine max
  • SE1820081
  • Mutator
  • M7
  • Gm17:15570783-15571273
  • ATTCTAAAA
  • GGCAAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTCTAAAA         GTAAA       CCC                                   A                                        C           A  C                         A       A               C                        ACGAC               AAT   -- TGTCAACTCCATGAAAGATG
         GGCAAAATT     TTTGGTT   CCTAGTTTATTTCCAGTTTTGGATTTGGTCCCCCA TAATTTAATTCACAAATTTGGTTCCCCTATTTTGTAAAAT GTGCAATGTTG TC CCCAGGCCACAATTGGACGTTGATC TTAACAA TGATGTTGACTGCCA GTGTCACGTTCTTATTGGATGATG     CACGTGTCATGTTCT   TGG  A                    
         |||||||||     |||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||     |||||||||||||||   |||  |                     
         CCGTTTTAA     AAACCAG   GGGTTAAATAGAGGTCAAAGCCTAAACCAGGGGGT ATTAAATTAAGTGTTTAAACCAGGGGGATAAAACATTTTA TACGTTACAAC AG GGGTCCGGTGTTAACCTGCAACTGG AATTGTT ACTACAATTGACGGT CACAGTGCAAGAATAACCTACTAC     GTGCACAGTACAAGA   ACT  T                    
AAAATCTTA         AGTAA       --A                                   C                                        A           C  A                         C       C               T                        -CAAC               CTA   AG TACTTTTGTTGTTAAGTAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3