SE1820130

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10458
  • Glycine max
  • SE1820130
  • Mutator
  • M1
  • Gm17:11173916-11174196
  • TAATTTTTG
  • GAGTGCTGCTAGGTGCACCCAGCATT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TAATTTTT     C                    --AT     ATGCACCCAGCACTAACCACGAAAAGACAAAAATACCCCTTACGGATCAAGTTGATTCGTAAGTTAATTTTTAAGACTTACAGATCAACTTGATCCGT
         GAGTG TGCTAGGTGCACCCAGCATT    TGCTG                                                                                                  
         ||||| ||||||||||||||||||||    |||||                                                                                                   
         CTCAC ACGATCCACGTGGGTCGTAA    TTTTT                                                                                                  
TTTTTAATC     A                    GAAA     ACCGTTTTGATGGGGACGATTAAAGAGAGGAATACCTAGTTCAACTAGGCATTCAACTAAAAATTCTGAATGCCTAGTTCAACTAGGCATTTTTTGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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