SE1820132

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10460
  • Glycine max
  • SE1820132
  • Mutator
  • M29
  • Gm16:24616277-24616562
  • ATTATAATA
  • ATTATAATAGAGCAAATGACAA

Secondary structure and sequence

TSD    TIR
5'



3' 
         A        G    CAATG    TAGTGCTTTATCAAATTATATACATATAATCTCACTCTTTTTTATTTTCCTAAATTAATCTCACTTTAAGTTTGAAAACGTCATATTAACATTCTTATATGTCTAAAAACAT
 ATTATAAT GAGCAAAT ACAA     CTTT                                                                                                                
 |||||||| |||||||| ||||     ||||                                                                                                                 
 TAATATTA CTCGTTTA TGTT     TGGG                                                                                                                
A        -        A    CATTA    AAACTCCAAAACACATTAATGTGTTTATAAGAAGATCAAAAATAAGTATATAAGTGGAGGAAATATCCACAATCACATTCTAAACTACCCCCGTAACTACCCACAGTGGGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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