SE1850133

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10461
  • Glycine max
  • SE1850133
  • PIF/harbinger
  • To20
  • Gm06:15125963-15126103
  • TTA
  • GGTGTGTTTGGTAGAGAGGAGAGAAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAT            AG      GA      ATATT        T   ---------------    CTTTTTT     G
    GGTGTGTTTGGT  AGAGGA  GAAATA     GGAGAGAA TTT               TGTA       TGTGG 
    ||||||||||||  ||||||  ||||||     |||||||| |||               ||||       ||||| A
    CCACACAAACCA  TCTCCT  CTTTAT     CTTCTCTT AAA               ACAT       ACACC 
ATTC            AA      AC      -----        T   AATTAATTTCATCTC    --TTTCC     T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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